PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63910.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 106aa    MW: 12458.9 Da    PI: 5.8505
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63910.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.52.5e-184998255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+e E+rRR++iN++f++Lre++P++     ++ +Ka+ L ++++YI+ Lq
  EPS63910.1 49 RSKHSETEQRRRSKINDRFQKLREIIPNS----EQRRDKASLLLEVIDYIQFLQ 98
                899*************************8....79******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.5114797IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-1847105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-2147105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.10E-1149102No hitNo description
PfamPF000109.7E-164998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-1353103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
EEEEEEEEEE EMLCMKTEMS SSSSSQPRKV EAKMTTTTAG RQKIPSTSRS KHSETEQRRR  60
SKINDRFQKL REIIPNSEQR RDKASLLLEV IDYIQFLQHK VSKLEG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010546222.19e-29PREDICTED: transcription factor BIM1 isoform X2
RefseqXP_010546223.11e-28PREDICTED: transcription factor BIM1 isoform X3
RefseqXP_010546225.11e-28PREDICTED: transcription factor BIM1 isoform X4
RefseqXP_010546221.11e-28PREDICTED: transcription factor BIM1 isoform X1
RefseqXP_010546220.11e-28PREDICTED: transcription factor BIM1 isoform X1
SwissprotQ9LEZ39e-27BIM1_ARATH; Transcription factor BIM1
TrEMBLS8CAP22e-70S8CAP2_9LAMI; Uncharacterized protein (Fragment)
STRINGBRADI3G38970.16e-28(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA89471821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-27BES1-interacting Myc-like protein 2
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]